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Comparative Analysis of RNAi-Based Methods to Down-Regulate Expression of Two Genes Expressed at Different Levels in Myzus persicae

机译:基于RNAi的方法下调桃蚜中不同水平表达的两个基因表达的比较分析

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摘要

With the increasing availability of aphid genomic data, it is necessary to develop robust functional validation methods to evaluate the role of specific aphid genes. This work represents the first study in which five different techniques, all based on RNA interference and on oral acquisition of double-stranded RNA (dsRNA), were developed to silence two genes, ALY and Eph, potentially involved in polerovirus transmission by aphids. Efficient silencing of only Eph transcripts, which are less abundant than those of ALY, could be achieved by feeding aphids on transgenic Arabidopsis thaliana expressing an RNA hairpin targeting Eph, on Nicotiana benthamiana infected with a Tobacco rattle virus (TRV)-Eph recombinant virus, or on in vitro-synthesized Eph-targeting dsRNA. These experiments showed that the silencing efficiency may differ greatly between genes and that aphid gut cells seem to be preferentially affected by the silencing mechanism after oral acquisition of dsRNA. In addition, the use of plants infected with recombinant TRV proved to be a promising technique to silence aphid genes as it does not require plant transformation. This work highlights the need to pursue development of innovative strategies to reproducibly achieve reduction of expression of aphid genes.
机译:随着蚜虫基因组数据可用性的提高,有必要开发强大的功能验证方法来评估特定蚜虫基因的作用。这项工作代表了第一项研究,其中开发了五种不同的技术,这些技术均基于RNA干扰并基于双链RNA(dsRNA)的口服获取,以沉默两个可能与蚜虫传播极地病毒有关的基因ALY和Eph。只有在感染了烟草拨浪鼓病毒(TRV)-Eph重组病毒的本氏烟草(Nicotiana benthamiana)上,以表达针对RNA的E发的拟南芥为食,将蚜虫饲喂在表达了RNA发夹的转基因拟南芥上,才能实现仅沉默不及ALY的Eph转录本有效的沉默,或在体外合成的靶向Eph的dsRNA上。这些实验表明,基因之间的沉默效率可能有很大差异,并且口服获得dsRNA后,蚜虫肠道细胞似乎受到沉默机制的优先影响。另外,使用重组TRV感染的植物被证明是使蚜虫基因沉默的有前途的技术,因为它不需要植物转化。这项工作强调需要开展创新策略以可重复实现减少蚜虫基因表达的需求。

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